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Cornell, Wendy D., Cieplak, Piotr, Bayly, Christopher I., Gould, Ian R., Merz, Kenneth M., Ferguson, David M., Spellmeyer, David C., Fox, Thomas, Caldwell, James W., Kollman, Peter A. (1995) A Second Generation Force Field for the Simulation of Proteins, Nucleic Acids, and Organic Molecules. Journal Of The American Chemical Society, 117 (19) 5179-5197 doi:10.1021/ja00124a002

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Reference TypeJournal (article/letter/editorial)
TitleA Second Generation Force Field for the Simulation of Proteins, Nucleic Acids, and Organic Molecules
JournalJournal Of The American Chemical Society
AuthorsCornell, Wendy D.Author
Cieplak, PiotrAuthor
Bayly, Christopher I.Author
Gould, Ian R.Author
Merz, Kenneth M.Author
Ferguson, David M.Author
Spellmeyer, David C.Author
Fox, ThomasAuthor
Caldwell, James W.Author
Kollman, Peter A.Author
Year1995 (May)Volume117
Issue19
PublisherAmerican Chemical Society (ACS)
DOIdoi:10.1021/ja00124a002Search in ResearchGate
Generate Citation Formats
Mindat Ref. ID1490240Long-form Identifiermindat:1:5:1490240:8
GUID0
Full ReferenceCornell, Wendy D., Cieplak, Piotr, Bayly, Christopher I., Gould, Ian R., Merz, Kenneth M., Ferguson, David M., Spellmeyer, David C., Fox, Thomas, Caldwell, James W., Kollman, Peter A. (1995) A Second Generation Force Field for the Simulation of Proteins, Nucleic Acids, and Organic Molecules. Journal Of The American Chemical Society, 117 (19) 5179-5197 doi:10.1021/ja00124a002
Plain TextCornell, Wendy D., Cieplak, Piotr, Bayly, Christopher I., Gould, Ian R., Merz, Kenneth M., Ferguson, David M., Spellmeyer, David C., Fox, Thomas, Caldwell, James W., Kollman, Peter A. (1995) A Second Generation Force Field for the Simulation of Proteins, Nucleic Acids, and Organic Molecules. Journal Of The American Chemical Society, 117 (19) 5179-5197 doi:10.1021/ja00124a002
In(1995, May) Journal Of The American Chemical Society Vol. 117 (19) American Chemical Society (ACS)

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Cornell, Wendy D., Cieplak, Piotr, Bayly, Christopher I., Gould, Ian R., Merz, Kenneth M., Ferguson, David M., Spellmeyer, David C., Fox, Thomas, Caldwell, James W., Kollman, Peter A. (1996) A Second Generation Force Field for the Simulation of Proteins, Nucleic Acids, and Organic MoleculesJ.Am.Chem.Soc.1995,117, 5179−5197. Journal Of The American Chemical Society, 118 (9) 2309 doi:10.1021/ja955032e
Cornell, Wendy D., Cieplak, Piotr, Bayly, Christopher I., Kollman, Peter A. (1993) Application of RESP charges to calculate conformational energies, hydrogen bond energies, and free energies of solvation. Journal Of The American Chemical Society, 115 (21) 9620-9631 doi:10.1021/ja00074a030
Cieplak, Piotr, Cornell, Wendy D., Bayly, Christopher, Kollman, Peter A. (1995) Application of the multimolecule and multiconformational RESP methodology to biopolymers: Charge derivation for DNA, RNA, and proteins. Journal of Computational Chemistry, 16 (11). 1357-1377 doi:10.1002/jcc.540161106
Bayly, Christopher I., Cieplak, Piotr, Cornell, Wendy, Kollman, Peter A. (1993) A well-behaved electrostatic potential based method using charge restraints for deriving atomic charges: the RESP model. The Journal of Physical Chemistry, 97 (40). 10269-10280 doi:10.1021/j100142a004
Weiner, Scott J., Kollman, Peter A., Case, David A., Singh, U. Chandra, Ghio, Caterina, Alagona, Guliano, Profeta, Salvatore, Weiner, Paul (1984) A new force field for molecular mechanical simulation of nucleic acids and proteins. Journal Of The American Chemical Society, 106 (3) 765-784 doi:10.1021/ja00315a051
Wang, Junmei, Wolf, Romain M., Caldwell, James W., Kollman, Peter A., Case, David A. (2005) Junmei Wang, Romain M. Wolf, James W. Caldwell, Peter A. Kollman, and David A. Case, "Development and testing of a general amber force field"Journal of Computational Chemistry(2004) 25(9) 1157-1174. Journal of Computational Chemistry, 26 (1). 114 doi:10.1002/jcc.20145
Meng, Elaine C., Cieplak, Piotr, Caldwell, James W., Kollman, Peter A. (1994) Accurate Solvation Free Energies of Acetate and Methylammonium Ions Calculated with a Polarizable Water Model. Journal Of The American Chemical Society, 116 (26) 12061-12062 doi:10.1021/ja00105a060
Yang, Lijiang, Tan, Chun-hu, Hsieh, Meng-Juei, Wang, Junmei, Duan, Yong, Cieplak, Piotr, Caldwell, James, Kollman, Peter A., Luo, Ray (2006) New-Generation Amber United-Atom Force Field. The Journal of Physical Chemistry B, 110 (26). 13166-13176 doi:10.1021/jp060163v
Srinivasan, Jayashree, Cheatham, Thomas E., Cieplak, Piotr, Kollman, Peter A., Case, David A. (1998) Continuum Solvent Studies of the Stability of DNA, RNA, and Phosphoramidate−DNA Helices. Journal Of The American Chemical Society, 120 (37) 9401-9409 doi:10.1021/ja981844+
Caldwell, James W., Kollman, Peter A. (1995) Cation-.pi. Interactions: Nonadditive Effects Are Critical in Their Accurate Representation. Journal Of The American Chemical Society, 117 (14) 4177-4178 doi:10.1021/ja00119a037
Weiner, Scott J., Kollman, Peter A., Nguyen, Dzung T., Case, David A. (1986) An all atom force field for simulations of proteins and nucleic acids. Journal of Computational Chemistry, 7 (2). 230-252 doi:10.1002/jcc.540070216
 
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