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Jones, Andrew, Townes, F. William, Li, Didong, Engelhardt, Barbara E. (2023) Alignment of spatial genomics data using deep Gaussian processes. Nature Methods, 20 (9) 1379-1387 doi:10.1038/s41592-023-01972-2

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Reference TypeJournal (article/letter/editorial)
TitleAlignment of spatial genomics data using deep Gaussian processes
JournalNature Methods
AuthorsJones, AndrewAuthor
Townes, F. WilliamAuthor
Li, DidongAuthor
Engelhardt, Barbara E.Author
Year2023 (September)Volume20
Issue9
PublisherSpringer Science and Business Media LLC
DOIdoi:10.1038/s41592-023-01972-2Search in ResearchGate
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Mindat Ref. ID16683188Long-form Identifiermindat:1:5:16683188:7
GUID0
Full ReferenceJones, Andrew, Townes, F. William, Li, Didong, Engelhardt, Barbara E. (2023) Alignment of spatial genomics data using deep Gaussian processes. Nature Methods, 20 (9) 1379-1387 doi:10.1038/s41592-023-01972-2
Plain TextJones, Andrew, Townes, F. William, Li, Didong, Engelhardt, Barbara E. (2023) Alignment of spatial genomics data using deep Gaussian processes. Nature Methods, 20 (9) 1379-1387 doi:10.1038/s41592-023-01972-2
In(2023, September) Nature Methods Vol. 20 (9) Springer Science and Business Media LLC

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Townes, F. William, Engelhardt, Barbara E. (2023) Nonnegative spatial factorization applied to spatial genomics. Nature Methods, 20 (2) 229-238 doi:10.1038/s41592-022-01687-w
Jones, Andrew, Townes, F. William, Li, Didong, Engelhardt, Barbara E. (2022) Contrastive latent variable modeling with application to case-control sequencing experiments. The Annals of Applied Statistics, 16 (3) doi:10.1214/21-aoas1534
Jones, Andrew, Cai, Diana, Li, Didong, Engelhardt, Barbara E. (2024) Optimizing the design of spatial genomic studies. Nature Communications, 15 (1) doi:10.1038/s41467-024-49174-4
(2023) Parts-based decomposition of spatial genomics data finds distinct tissue regions. Nature Methods, 20 (2) 187-188 doi:10.1038/s41592-022-01725-7
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Tang, Lin (2023) Large models for genomics. Nature Methods, 20 (12) 1868 doi:10.1038/s41592-023-02105-5
Zhang, Boyang; Nyquist, Sarah; Jones, Andrew; Engelhardt, Barbara E.; Li, Didong (2025) Contrastive linear regression. The Annals of Applied Statistics, 19 (3). doi:10.1214/24-aoas1977
Tang, Lin (2023) Genomics data integration. Nature Methods, 20 (1) 34 doi:10.1038/s41592-022-01736-4
(2023) Spatial Omics DataBase (SODB): increasing accessibility to spatial omics data. Nature Methods, 20 (3) 359-360 doi:10.1038/s41592-023-01772-8
(2023) Deep-learning language models help to improve protein sequence alignment. Nature Methods, 20 (1) 40-41 doi:10.1038/s41592-022-01707-9
 
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