Vote for your favorite mineral in #MinCup25! - Calcite vs. Perovskite
This match of heavy hitters is bound to end in heartbreak as classic calcite faces off against futuristic perovskite.
Log InRegister
Quick Links : The Mindat ManualThe Rock H. Currier Digital LibraryMindat Newsletter [Free Download]
Home PageAbout MindatThe Mindat ManualHistory of MindatCopyright StatusWho We AreContact UsAdvertise on Mindat
Donate to MindatCorporate SponsorshipSponsor a PageSponsored PagesMindat AdvertisersAdvertise on Mindat
Learning CenterWhat is a mineral?The most common minerals on earthInformation for EducatorsMindat ArticlesThe ElementsThe Rock H. Currier Digital LibraryGeologic Time
Minerals by PropertiesMinerals by ChemistryAdvanced Locality SearchRandom MineralRandom LocalitySearch by minIDLocalities Near MeSearch ArticlesSearch GlossaryMore Search Options
Search For:
Mineral Name:
Locality Name:
Keyword(s):
 
The Mindat ManualAdd a New PhotoRate PhotosLocality Edit ReportCoordinate Completion ReportAdd Glossary Item
Mining CompaniesStatisticsUsersMineral MuseumsClubs & OrganizationsMineral Shows & EventsThe Mindat DirectoryDevice SettingsThe Mineral Quiz
Photo SearchPhoto GalleriesSearch by ColorNew Photos TodayNew Photos YesterdayMembers' Photo GalleriesPast Photo of the Day GalleryPhotography

Tong, Jing, Sadreyev, Ruslan I., Pei, Jimin, Kinch, Lisa N., Grishin, Nick V. (2015) Using homology relations within a database markedly boosts protein sequence similarity search. Proceedings of the National Academy of Sciences, 112 (22) 7003-7008 doi:10.1073/pnas.1424324112

Advanced
   -   Only viewable:
Reference TypeJournal (article/letter/editorial)
TitleUsing homology relations within a database markedly boosts protein sequence similarity search
JournalProceedings of the National Academy of Sciences
AuthorsTong, JingAuthor
Sadreyev, Ruslan I.Author
Pei, JiminAuthor
Kinch, Lisa N.Author
Grishin, Nick V.Author
Year2015 (June 2)Volume112
Issue22
PublisherProceedings of the National Academy of Sciences
DOIdoi:10.1073/pnas.1424324112Search in ResearchGate
Generate Citation Formats
Mindat Ref. ID1837397Long-form Identifiermindat:1:5:1837397:8
GUID0
Full ReferenceTong, Jing, Sadreyev, Ruslan I., Pei, Jimin, Kinch, Lisa N., Grishin, Nick V. (2015) Using homology relations within a database markedly boosts protein sequence similarity search. Proceedings of the National Academy of Sciences, 112 (22) 7003-7008 doi:10.1073/pnas.1424324112
Plain TextTong, Jing, Sadreyev, Ruslan I., Pei, Jimin, Kinch, Lisa N., Grishin, Nick V. (2015) Using homology relations within a database markedly boosts protein sequence similarity search. Proceedings of the National Academy of Sciences, 112 (22) 7003-7008 doi:10.1073/pnas.1424324112
In(2015, June) Proceedings of the National Academy of Sciences Vol. 112 (22) Proceedings of the National Academy of Sciences

See Also

These are possibly similar items as determined by title/reference text matching only.

Schaeffer, R. Dustin, Zhang, Jing, Kinch, Lisa N., Pei, Jimin, Cong, Qian, Grishin, Nick V. (2023) Classification of domains in predicted structures of the human proteome. Proceedings of the National Academy of Sciences, 120 (12) doi:10.1073/pnas.2214069120
Pei, J., Dokholyan, N. V., Shakhnovich, E. I., Grishin, N. V. (2003) Using protein design for homology detection and active site searches. Proceedings of the National Academy of Sciences, 100 (20) 11361-11366 doi:10.1073/pnas.2034878100
Medvedev, Kirill E., Kinch, Lisa N., Dustin Schaeffer, R., Pei, Jimin, Grishin, Nick V. (2021) A Fifth of the Protein World: Rossmann-like Proteins as an Evolutionarily Successful Structural unit. Journal of Molecular Biology, 433 (4) 166788pp. doi:10.1016/j.jmb.2020.166788
Pei, Jimin, Kinch, Lisa N., Grishin, Nick V. (2018) FlyXCDB—A Resource for Drosophila Cell Surface and Secreted Proteins and Their Extracellular Domains. Journal of Molecular Biology, 430 (18). 3353-3411 doi:10.1016/j.jmb.2018.06.002
Shi, Jun, Bi, Pengpeng, Pei, Jimin, Li, Hui, Grishin, Nick V., Bassel-Duby, Rhonda, Chen, Elizabeth H., Olson, Eric N. (2017) Requirement of the fusogenic micropeptide myomixer for muscle formation in zebrafish. Proceedings of the National Academy of Sciences, 114 (45) 11950-11955 doi:10.1073/pnas.1715229114
Alam, I., Dress, A., Rehmsmeier, M., Fuellen, G. (2004) Comparative homology agreement search: An effective combination of homology-search methods. Proceedings of the National Academy of Sciences, 101 (38) 13814-13819 doi:10.1073/pnas.0405612101
Salomon, D., Kinch, L. N., Trudgian, D. C., Guo, X., Klimko, J. A., Grishin, N. V., Mirzaei, H., Orth, K. (2014) Marker for type VI secretion system effectors. Proceedings of the National Academy of Sciences, 111 (25) 9271-9276 doi:10.1073/pnas.1406110111
Tong, Kevin, Skibbens, Robert V. (2015) Pds5 regulators segregate cohesion and condensation pathways in Saccharomyces cerevisiae. Proceedings of the National Academy of Sciences, 112 (22) 7021-7026 doi:10.1073/pnas.1501369112
Rada, C., Jarvis, J. M., Milstein, C. (2002) AID-GFP chimeric protein increases hypermutation of Ig genes with no evidence of nuclear localization. Proceedings of the National Academy of Sciences, 99 (10) 7003-7008 doi:10.1073/pnas.092160999
Dotto, G. P., Zinder, N. D. (1984) Increased intracellular concentration of an initiator protein markedly reduces the minimal sequence required for initiation of DNA synthesis. Proceedings of the National Academy of Sciences, 81 (5) 1336-1340 doi:10.1073/pnas.81.5.1336
(2015) PNAS Plus Significance Statements. Proceedings of the National Academy of Sciences, 112 (22) 6786-6788 doi:10.1073/pnas.ss11222
 
and/or  
Mindat.org is an outreach project of the Hudson Institute of Mineralogy, a 501(c)(3) not-for-profit organization.
Copyright © mindat.org and the Hudson Institute of Mineralogy 1993-2025, except where stated. Most political location boundaries are © OpenStreetMap contributors. Mindat.org relies on the contributions of thousands of members and supporters. Founded in 2000 by Jolyon Ralph.
To cite: Ralph, J., Von Bargen, D., Martynov, P., Zhang, J., Que, X., Prabhu, A., Morrison, S. M., Li, W., Chen, W., & Ma, X. (2025). Mindat.org: The open access mineralogy database to accelerate data-intensive geoscience research. American Mineralogist, 110(6), 833–844. doi:10.2138/am-2024-9486.
Privacy Policy - Terms & Conditions - Contact Us / DMCA issues - Report a bug/vulnerability Current server date and time: September 4, 2025 11:57:50
Go to top of page